Table Management

Determining Table and Relation Size

The usual way to find table sizes in PostgreSQL, pg_total_relation_size, drastically under-reports the size of distributed tables. All this function does on a Citus cluster is reveal the size of tables on the coordinator node. In reality the data in distributed tables lives on the worker nodes (in shards), not on the coordinator. A true measure of distributed table size is obtained as a sum of shard sizes. Citus provides helper functions to query this information.

UDF

Returns

citus_relation_size(relation_name)

  • Size of actual data in table (the “main fork”).

  • A relation can be the name of a table or an index.

citus_table_size(relation_name)

citus_total_relation_size(relation_name)

  • citus_table_size plus:

    • size of indices

These functions are analogous to three of the standard PostgreSQL object size functions, with the additional note that

  • They work only when citus.shard_replication_factor = 1.

  • If they can’t connect to a node, they error out.

Here is an example of using one of the helper functions to list the sizes of all distributed tables:

SELECT logicalrelid AS name,
       pg_size_pretty(citus_table_size(logicalrelid)) AS size
  FROM pg_dist_partition;

Output:

┌───────────────┬───────┐
│     name      │ size  │
├───────────────┼───────┤
│ github_users  │ 39 MB │
│ github_events │ 37 MB │
└───────────────┴───────┘

Vacuuming Distributed Tables

In PostgreSQL (and other MVCC databases), an UPDATE or DELETE of a row does not immediately remove the old version of the row. The accumulation of outdated rows is called bloat and must be cleaned to avoid decreased query performance and unbounded growth of disk space requirements. PostgreSQL runs a process called the auto-vacuum daemon that periodically vacuums (aka removes) outdated rows.

It’s not just user queries which scale in a distributed database, vacuuming does too. In PostgreSQL big busy tables have great potential to bloat, both from lower sensitivity to PostgreSQL’s vacuum scale factor parameter, and generally because of the extent of their row churn. Splitting a table into distributed shards means both that individual shards are smaller tables and that auto-vacuum workers can parallelize over different parts of the table on different machines. Ordinarily auto-vacuum can only run one worker per table.

Due to the above, auto-vacuum operations on a Citus cluster are probably good enough for most cases. However for tables with particular workloads, or companies with certain “safe” hours to schedule a vacuum, it might make more sense to manually vacuum a table rather than leaving all the work to auto-vacuum.

To vacuum a table, simply run this on the coordinator node:

VACUUM my_distributed_table;

Using vacuum against a distributed table will send a vacuum command to every one of that table’s placements (one connection per placement). This is done in parallel. All options are supported (including the column_list parameter) except for VERBOSE. The vacuum command also runs on the coordinator, and does so before any workers nodes are notified. Note that unqualified vacuum commands (i.e. those without a table specified) do not propagate to worker nodes.

Analyzing Distributed Tables

PostgreSQL’s ANALYZE command collects statistics about the contents of tables in the database. Subsequently, the query planner uses these statistics to help determine the most efficient execution plans for queries.

The auto-vacuum daemon, discussed in the previous section, will automatically issue ANALYZE commands whenever the content of a table has changed sufficiently. The daemon schedules ANALYZE strictly as a function of the number of rows inserted or updated; it has no knowledge of whether that will lead to meaningful statistical changes. Administrators might prefer to manually schedule ANALYZE operations instead, to coincide with statistically meaningful table changes.

To analyze a table, run this on the coordinator node:

ANALYZE my_distributed_table;

Citus propagates the ANALYZE command to all worker node placements.